Meet the folks in the ToBo (Toonen
& Bowen) Lab.
The
P.I.s:
Brian Bowen: My research program is
designed to serve conservation goals by illuminating the
evolutionary
processes that generate biodiversity. In terrestrial systems, populations are
usually defined by discontinuous fragments of habitat. These populations may
eventually develop intrinsic reproductive barriers, the starting point for
speciation. Hence habitat discontinuities may explain most cases of speciation
on land, but what about speciation in the sea, where few such barriers exist?
In the sea, the evolutionary rules may be different, or they may operate on a
vastly different scale due to the connectivity of a trans-global aquatic
medium.
Rob Toonen:
I did my Master’s Degree in the Pawlik Lab at
UNCW, before moving on to a PhD in the Grosberg
Lab at UC Davis. I joined the
faculty at the Hawaii Institute of Marine
Biology in 2003, but I have a hard time describing my research program in
a few sentences. During my research career, I have used a variety of approaches
(including individual behavioral assays,
ecological
experiments in both the field and laboratory, and molecular genetic tools) in
an effort to address a variety of interesting biological questions. I don’t
really fit neatly into a traditional field, but I tend to focus my research
interests primarily on marine invertebrates. Projects that I have been involved
with over the years include jellyfish feeding behavior, chemical defenses of
coral reef sponges, genetic structure and patterns of dispersal in coral reef
invertebrates, invasion biology, conservation and marine protected area design,
cues for larval settlement, population genetics and phylogenetics
of marine invertebrates, and marine ornamental culture & aquarium
science.
Obviously, with that grocery list of interests, it is not easy to describe my research interests fully in a paragraph here. However, much of my current research focuses on the processes that influence dispersal and recruitment in coastal marine invertebrates, and I am particularly interested in the evolutionary consequences of larval developmental modes among Hawaiian coral reef species. In general, I try to approach my research from an ecological perspective to scale up from genes to individuals to populations, and ultimately to the micro- and macro-evolutionary consequences of the processes being studied.
Our
Lab Manager:

Zoltan szabo: Zoli comes to us as
a former post-doc in the UH Manoa medical school who
decided that he wanted to spend less time searching for mutations in elastin, and more time diving. He is working on a number of projects to
retrain as a marine biologist as he makes ends meet by managing the lab and
helping out with the various research projects listed below.
The
Post-docs:
Matt Craig: My research focuses
on explaining the processes which create patterns of marine biodiversity. To
accomplish this, I use both traditional, systematic approaches,
as well as recent advances in coalescent theory and its application to phylogeography. In collaboration with several members of
the ToBo Lab, as well as colleagues both abroad and
in the
Chris Bird: The endemic limpets of
with
prominent cultural significance in
Kim Selkoe: I am generally
interested in using population genetic tools to answer ecological questions in
marine systems. I am currently working
on
two projects for the Northwestern Hawaiian Islands Coral
Reef Ecosystem Reserve Initiative: (1) I am evaluating the vulnerability of the
NWHI ecosystem to anthropogenic threats with an approach that considers the ecological
impacts of threats on different habitats.
GIS whiz Eric Franklin will help me to map the distribution of threats
and their impacts on the NWHI. (2) I am
developing a simulation approach to inferring connectivity patterns from
empirical genetic datasets. This is an individual-based
model, coded in Matlab by my collaborator Brian Kinlan, that
allows detailed input of values for many life history, dispersal, demographic,
marker and sampling parameters in order to mimic real datasets. I will team up with all of the other ToBo
lab members working on the population genetics of NWHI species to analyze their
datasets with this tool and build a community-level picture of similarities and
differences in connectivity patterns across the NWHI.
Luiz Rocha: My research
interests and experience are centered on the evolution, phylogeography
(or the geographic distribution of genetic lineages), biogeography, systematics and community and behavioral ecology of coral
reef fishes. I frequently try to combine these fields, invoking ecology to help
explain evolutionary patterns and using molecular tools to test biogeographic and systematic hypotheses. The overall
objective of this interdisciplinary research is to test existing hypotheses
(and propose new ones) about what generates and maintains the extremely high
biodiversity in tropical coral reefs.
The
Students working in our lab:
Kim Andrews: The Hawaiian spinner dolphin (Stenella longirostris)
is found throughout all of the
main
Dan Barshis:
In the near future, the threat of Global Climate Change will increase
dramatically. Natural resource
managers
around the world will be faced with the challenge of how to combat a universal
problem on local scale. Because of the
minimal response of national and international communities to this imminent
threat, the responsibility will likely fall on the shoulders of local area
policy makers, ecologists, and resource managers to develop effective
conservation strategies. My research
focuses on developing an ecological framework from which to understand the
response of corals to large-scale environmental changes. I am examining specific internal mechanisms
that the corals and their associated symbionts can
use to survive environmental stresses, specifically, the production of
heat-stress and antioxident defense proteins. If it is shown that intrinsically some corals
are predisposed towards surviving stress, than it is important to protect these
areas from local disturbances so they may serve the purpose of regeneration
after large-scale mortality events.
Greg Concepcion: Greg is interested in the systematics
and phylogeograpy of scleractinian corals, and is
working on the
phylogeography and evolution of Hawaiian Acroporid corals for his dissertation. He has been developing new molecular markers
to use for his research as a graduate student starting this fall. He is currently evaluating these new tools
for use in clarifying species-level relationships among scleractinian corals,
and together with a variety of collaborators is trying to complete a world-wide
phylogeny of the coral genus Pocillopora. Greg is
also collaborating with Marc Crepeau and Sam Kahng (below) on a study of the snowflake coral, Carijoa riisei. The snowflake coral was first reported in
Toby Daly-Engel: Many animals, including sharks, have a
reproductive strategy that includes multiple paternity,
which is the fertilization of a single batch of eggs by sperm from more than
one male. Females accomplish this by storing sperm from multiple matings for long periods of time in a gland called the oviducal, and using it to self-fertilize later. This
practice is thought to maintain genetic diversity, especially in populations
that are small or have undergone population depletion due to human exploitation
and other pressures. This project addresses the question of multiple paternity
in three related species of sharks in
Matt Dunlap: The
of
the reefs both protects them, and endangers them. My research will use molecular techniques to
address important questions about coral reef ecosystem monitoring and marine
reserve design. For a couple of years, I have been working with the
National Marine Fisheries Service in the Coral Reef Ecosystem Division to
categorize benthic habitat with video towboard
surveys of these remote coral reefs. The goal is to characterize the ecosystem
regularly and identify change. Some
questions to be addressed by molecular techniques are: how much overlap is
there between populations of the various islands of the NWHI? For
example, if an entire coral population on one island were lost to bleaching,
would new recruits come from elsewhere? The identification of adult and
newly settled coral recruits with genetic methods is a potentially useful tool,
because visual identification is problematic.
Jeff Eble: The collection of fishes from the wild for
the aquarium trade is a hot issue here in
documented
declines in the abundance of collected species.
The state of
Anuschka Faucci: Anuschka is a
student of Mike Hadfield,
but currently working on two projects in collaboration with our lab. She recently finished a phylogenetic
study of host preference in Phestilla nudibranchs, and is now working to complete her
dissertation project. Her main dissertation
research focuses on the systematics and phylogeography of vermetid
gastropods in the Hawaiian Archipelago, and the role of life history
differences in patterns of connectivity among marine invertebrates.
Michelle Gaither: Coral reef
ecosystems are facing a perilous future due to a number of well-defined factors
that include over-
fishing, pollution, and habitat destruction. To preserve
the biodiversity inherent in these rich ecosystems and to protect overexploited
resources, many nations are setting aside areas of coral reef habitat to form
marine protected areas (MPAs). Due to social and political constraints the
amount of habitat that can be set aside and the degree of protection it can be
afforded is limited. As a result scientists and managers must carefully design
these preserves to ensure maximum benefit. Understanding population dynamics of
reef organisms, the extent of larval dispersal, and the patterns of
interconnection of local populations, are essential to the design of MPAs. For
my dissertation, I am studying recruitment in reef-fish populations around the
Ranya Henson: has just begun to work in the lab, and has yet to add
anything to the web page. Her interests
include invertebrate biology, phylogeography and
population structure, and plans examine phylogeography
of the shingle urchin genus Colobocentrotus.
Matt Iacchei: Matt’s interests include community ecology, conservation biology,
& population genetics. He is currently
using molecular genetic techniques to study the population genetics of Hawaiian
spiny lobster (Panulirus marginatus)
and scaly slipper lobster (Scyllarides squammosus) across the Hawaiian archipelago. He is also involved in projects tracking
movements of
Joe O’Malley: In 2000, after 25
years of operations, the Hawaii-based commercial fishery for spiny lobster (Panulirus marginatus)
and slipper
lobster (Scyllarides squammosus) in the Northwestern Hawaiian Islands was
closed because of increasing uncertainty about the status of the lobster stocks
and the mathematical population models used to assess the stocks and their
abundance. The NWHI lobster fishery had
been one of
Jon
Puritz: Recent actions in public policy such as the
Final Report of the U.S. Commission on Ocean Policy and the Kyoto Protocol are
designed to identify and remedy
negative
anthropogenic alterations to the environment and to the species of the global
biosphere. These polices are dependent on ground-breaking ecological and
conservational research that reveals the wide-ranging impacts of industrialized
life. However, most of this research has
only emerged in the last two decades and remains focused on readily apparent
biological indicators, and analyses of proposed conservation solutions often
focus only on ecological/economic indicators. The swiftness and magnitude of
anthropogenic ecological forces may have farther-reaching, long-term
implications beyond what is already understood; altering ecosystems will
influence the evolution of species contained within them, and applying
conservation solutions without a complete understanding of the ecosystem,
ecologically and evolutionarily, may doom our efforts.
Marine ecosystems, in particular, face a precarious
situation: large social and economic needs for conservation, but limited
evolutionary research on these unique systems.
As the largest biosphere on the planet, the world's oceans provide many
important ecosystem services, but complex trophic
interactions, multipart oceanographic processes, and the potential for high
gene flow (80 percent of all marine taxa have
planktonic larvae) makes their evolutionary study a daunting task. I hope to combine ecological field sampling
techniques with evolutionary lab methods into a research approach that can
uniquely address the challenges of marine systems and to further the knowledge
of the evolutionary consequences of modern industrialized society.
Jenny
Schultz: Have you ever
wondered why some marine fish are found throughout the world and
others
are only found locally? It is not
surprising that highly migratory oceanic species are widely dispersed;
likewise, ocean currents may carry fish eggs and larvae very far. But how is it
possible that a live-bearing species with limited movement can be found in all
oceans? The lemon shark is one such
species. Individuals give birth to live
young and have a small home range, yet both Pacific and Atlantic species
exhibit a wide distribution throughout their respective ocean basins. Is their present-day distribution reflective
of an ancient dispersal before the spreading of continents or the emergence of
oceanographic or geological barriers? Or
do these “coastal” sharks migrate much farther than we realize, even across the
open ocean? I will answer these
questions by comparing the DNA of lemon sharks from throughout the world.
My second project revolves around
the endangered Hawaiian monk seal which is found only in
Derek skillings:
Derek is interested in both biology and
philosophy, and is hoping to combine them in his dissertation. He is currently working on the population
genetic structure of sea cucumbers (Holothuria atra & H. whitmaei) across the Hawaiian archipelago. In collaboration with members of Paul Barber & Gustav Paulay’s labs, he is also planning to complete a study of
population structure in these edible sea cucumbers across the entire Pacific.
Tonatiuh Trejo: Effective
conservation and management strategies for commercially targeted marine fishes
require knowledge of
their population structure.
I am using microsatellites as a genetic marker to study the population
structure, genetic diversity, patterns of dispersal, and the age and stability
of Pacific stocks of two species of deepwater snappers, Ehu
(Etelis carbunculus)
and Onaga (Etelis coruscans).
These fishes occur throughout the
In
addition to my current research, I hope to continue previous molecular work
I've done with sharks. I recently
graduated from the Moss Landing Marine Laboratories, where I studied the global
phylogeography of thresher sharks (Alopias pelagicus, A. superciliosus,
and A. vulpinus). My data provide evidence for significant
genetic differentiation among thresher shark populations; therefore,
international cooperation will be required for the sustainable management of
these species, which are vulnerable to exploitation because they grow slowly,
produce few offspring, and have long inter-birth intervals.
Kim Weersing: My research
interests are diverse, so narrowing my focus for grad school turned out to be a
lengthy and meandering
task which involved working on seabird foraging projects in
Nick Whitney: Whitetip reef sharks (Triaenodon obesus) don’t seem to move around much. Though most
sharks have to keep swimming in order to breath, whitetips
can breathe while lying in place. They take advantage of this skill by resting
in caves for much of the
daylight hours, and only come out at night to feed on the
reef. Despite spending so much time resting, whitetips
can be found throughout the tropical Pacific and
Other
folks working in the lab with us:
Ross Shaw: Ross is a faculty member in the Department of
Biology at Grant MacEwan College in Edmonton, Alberta, Canada. He came out for a summer professional
exchange program to learn molecular techniques of studying coral population
biology, and we plan to continue that collaboration into the future. Together with Greg Concepcion (above), Ross is
currently working on a phylogeny of the Hawaiian coral genus Montipora with a focus on some Species of Concern
for conservation and management.
Carly Allen & Crow White: are working on the whelk Kelletia kelletia in collaboration with Danielle Zacherl to compare directly the results of population genetic inferences of larval dispersal and connectivity to those obtained with statolith microchemistry.
Alumni:
Kanesa
Duncan: Kanesa completed her dissertation on scalloped hammerhead
sharks in 2005, and promptly moved on to a teaching position in Biology at Manoa. Her research
focused on the importance of nurseries for juvenile hammerhead sharks: We know
that nurseries are important habitats for newborn scalloped hammerhead sharks (Sphyrna lewini) for
at least a year. However, we wondered about the importance of specific
nurseries, like
investigate
this, we collected small clips of shark fin from baby sharks in nurseries
around the world. We collected from the Pacific, Indian, and

Sarah Daley: Sarah came to

Marc Crepeau: Marc worked as our lab manager from 2004-2006,
before moving on to manage a medical lab in
Laurie
Sorenson: worked in our lab
as part of the NSF/Sea-Grant funded Marine Science Undergraduate Research
Fellowship (MSURF) program before becoming a lab assistant on a variety of
projects for the remainder of her undergraduate degree. She did a great job and recently moved on to
a graduate program to pursue her own research.
Sam Kahng: Sam completed his dissertation in 2006, and
is currently applying for jobs.
industry
is now threatened by the growth of the snowflake coral, Carijoa riisei.
The snowflake coral is overgrowing black coral colonies and invading
large expanses of barren areas on the ocean floor. Despite its potential economic significance
very little is known about the origin, reproduction and dispersal of Carijoa. Although typically known as a shallow water species, in its native range, in 2001
deep-water surveys near
Brian Boeing: Brian completed his Master’s degree in
Oceanography in 2007 before departing to travel around the world for a
year. Coral bleaching, in which corals
lose their photosynthetic algal symbionts, is a
phenomenon that is recognized as one of fundamental
ecological
importance. However, mechanisms by which bleaching occurs are not at all well
understood. Nitric Oxide Synthase (NOS) is an enzyme
which beaks down the amino acid arginine to form the
free radical gaseous signaling molecule Nitric Oxide (NO). It has previously
been shown that the amount of NO produced by the algal symbiont
corresponds to the amount of bleaching undergone by that particular coral
colony. Also different types of algal symbionts that
live inside the corals produce different amounts of NO under the same stressed
conditions and therefore undergo different amounts of bleaching. Biochemical
and molecular biological tools will be used to study the dynamics of the
coral-algal symbioses, which will present a more clearly defined picture of the
intricacies of coral bleaching.
Iliana Baums: Iliana completed
her post-doc in the ToBo lab in 2006 before moving to
a faculty position at
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